HBCD_CBRAIN_PROCESSING

Contents:

  • Relevant BIDS Details for HBCD Processing
    • Structure of Processing Outputs
  • Tool Details Overview
    • Processing workflow
    • Tool Names
      • bibsnet (CBRAIN Tool Config ID: 11353)
        • External Requirements
        • Other Processing Settings
        • Pipeline Outputs
        • Command Line Template
        • File Selection For Processing
        • Quality Control Selection Information
      • bme_x (CBRAIN Tool Config ID: 11129)
        • External Requirements
        • Other Processing Settings
        • Pipeline Outputs
        • Command Line Template
        • File Selection For Processing
        • Quality Control Selection Information
      • hbcd_motion (CBRAIN Tool Config ID: 7604)
        • External Requirements
        • Other Processing Settings
        • Pipeline Outputs
        • Command Line Template
        • File Selection For Processing
      • made (CBRAIN Tool Config ID: 11371)
        • External Requirements
        • Other Processing Settings
        • Pipeline Outputs
        • Command Line Template
        • File Selection For Processing
        • Quality Control Selection Information
      • mriqc (CBRAIN Tool Config ID: 3791)
        • External Requirements
        • Other Processing Settings
        • Pipeline Outputs
        • Command Line Template
        • File Selection For Processing
        • Quality Control Selection Information
      • nibabies_25.2.0-0f306a2f (CBRAIN Tool Config ID: 11317)
        • Configuration Details
        • External Requirements
        • Ancestor Pipelines
        • Other Processing Settings
        • Pipeline Outputs
        • Command Line Template
        • File Selection For Processing
        • Quality Control Selection Information
      • nibabies_25.2.0-2afa9081 (CBRAIN Tool Config ID: 11356)
        • Configuration Details
        • External Requirements
        • Ancestor Pipelines
        • Other Processing Settings
        • Pipeline Outputs
        • Command Line Template
        • File Selection For Processing
        • Quality Control Selection Information
      • osprey (CBRAIN Tool Config ID: 9242)
        • External Requirements
        • Ancestor Pipelines
        • Other Processing Settings
        • Pipeline Outputs
        • Command Line Template
        • File Selection For Processing
        • Quality Control Selection Information
      • qmri_postproc (CBRAIN Tool Config ID: 7342)
        • External Requirements
        • Ancestor Pipelines
        • Other Processing Settings
        • Pipeline Outputs
        • Command Line Template
        • File Selection For Processing
        • Quality Control Selection Information
      • qsiprep (CBRAIN Tool Config ID: 7808)
        • External Requirements
        • Other Processing Settings
        • Pipeline Outputs
        • Command Line Template
        • File Selection For Processing
        • Quality Control Selection Information
      • qsirecon (CBRAIN Tool Config ID: 7805)
        • External Requirements
        • Ancestor Pipelines
        • Other Processing Settings
        • Pipeline Outputs
        • Command Line Template
        • File Selection For Processing
        • Quality Control Selection Information
      • xcp_d-0f306a2f+0ef9c88a (CBRAIN Tool Config ID: 11359)
        • Configuration Details
        • External Requirements
        • Ancestor Pipelines
        • Other Processing Settings
        • Pipeline Outputs
        • Command Line Template
      • xcp_d-2afa9081+0ef9c88a (CBRAIN Tool Config ID: 11419)
        • Configuration Details
        • External Requirements
        • Ancestor Pipelines
        • Other Processing Settings
        • Pipeline Outputs
        • Command Line Template
  • Understanding Boutiques Descriptors
    • BoutiquesBidsSingleSubjectMaker and other “Custom” modules
  • References
  • Workflow managing CBRAIN Processing
HBCD_CBRAIN_PROCESSING
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