Tool Details Overview
The pages linked towards the bottom provide information about the tools used for HBCD processing. Details including which arguments are used for processing, and which files are required for processing are also found in these pages.
These pages are intended to provide a general reference for users who are interested in understanding how processing is conducted. All pages that you see below are auto-populated based on the processing configuration files in the HBCD_CBRAIN_PROCESSING repository, and versions of the Boutiques descriptors that we have stored in CBRAIN. For HBCD datasets that are processed in CBRAIN, similar information is also (for the most part) automatically saved out to the subject level or session level derivatives folder. These files are directly derived from the processing task, providing a more accurate and robust description than the summary provided here. If you are interested in learning about these files, please see this page.
Tool Names
- bibsnet (CBRAIN Tool Config ID: 7631)
- hbcd_motion (CBRAIN Tool Config ID: 7604)
- hbcd_qc (CBRAIN Tool Config ID: 6878)
- made (CBRAIN Tool Config ID: 7856)
- mriqc (CBRAIN Tool Config ID: 3791)
- nibabies (CBRAIN Tool Config ID: 7838)
- osprey (CBRAIN Tool Config ID: 7522)
- qmri_postproc (CBRAIN Tool Config ID: 7342)
- qsiprep (CBRAIN Tool Config ID: 7808)
- qsirecon (CBRAIN Tool Config ID: 7805)
- xcp_d (CBRAIN Tool Config ID: 8503)